Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DW150_03435 | Not Available | - | 852801 - 853553 | 29034.4 |
| glycosyltransferase family 4 protein | DW150_03440 | Not Available | - | 853567 - 854736 | 44889.1 |
| alpha-1,2-fucosyltransferase | DW150_03445 | Not Available | - | 854741 - 855562 | 32157.8 |
| acyltransferase | DW150_03450 | Not Available | - | 855564 - 856154 | 21494.5 |
| glycosyltransferase | DW150_03455 | Not Available | - | 856157 - 857356 | 46177.5 |
| o-antigen ligase domain-containing protein | DW150_03460 | Not Available | - | 857364 - 858734 | 53168.1 |
| glycosyltransferase family 2 protein | DW150_03465 | Not Available | - | 858788 - 859678 | 34815.4 |
| glycosyltransferase family 2 protein | DW150_03470 | Not Available | - | 859702 - 860724 | 39959.4 |
| sugar transporter | DW150_03475 | Not Available | - | 860726 - 862264 | 58413.1 |
| hypothetical protein | DW150_03480 | Not Available | - | 862633 - 862830 | 7980.66 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
