Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lruc domain-containing protein | DW150_03230 | Not Available | - | 807526 - 809403 | 71324.9 |
| udp-glucose 4-epimerase gale | DW150_03235 | Not Available | - | 809698 - 810732 | 37984.7 |
| hypothetical protein | DW150_03240 | Not Available | - | 810765 - 811661 | 33994.2 |
| electron transport complex subunit rsxa | DW150_03245 | Not Available | - | 811802 - 812404 | 21298.3 |
| electron transport complex subunit rsxe | DW150_03250 | Not Available | - | 812423 - 813007 | 20536.4 |
| rnfabcdge type electron transport complex subunit g | DW150_03255 | Not Available | - | 813022 - 813813 | 27045.9 |
| rnfabcdge type electron transport complex subunit d | DW150_03260 | Not Available | - | 813810 - 814799 | 35342.5 |
| electron transport complex subunit rsxc | DW150_03265 | Not Available | - | 814814 - 816151 | 47119.8 |
| fe-s cluster domain-containing protein | DW150_03270 | Not Available | - | 816191 - 817144 | 32607.8 |
| rsec/mucc family positive regulator of sigma(e) | DW150_03275 | Not Available | - | 817165 - 817593 | 15752.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
