Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_03175 | Not Available | + | 793684 - 795069 | 48494.0 |
| duf3943 domain-containing protein | DW150_03180 | Not Available | + | 795108 - 796580 | 56330.3 |
| crp/fnr family transcriptional regulator | DW150_03185 | Not Available | - | 796577 - 797155 | 22598.6 |
| peptidase | DW150_03190 | Not Available | + | 797299 - 798897 | 60227.0 |
| aminopeptidase | DW150_03195 | Not Available | + | 798929 - 800119 | 45304.6 |
| s9 family peptidase | DW150_03200 | Not Available | + | 800251 - 802482 | 84337.5 |
| hypothetical protein | DW150_03205 | Not Available | + | 802658 - 804145 | 56204.9 |
| hypothetical protein | DW150_03210 | Not Available | + | 804204 - 804584 | 14323.3 |
| aspartate ammonia-lyase | DW150_03220 | Not Available | - | 804799 - 806232 | 52198.2 |
| yitt family protein | DW150_03225 | Not Available | - | 806495 - 807385 | 32559.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
