Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | DW150_02915 | Not Available | - | 753503 - 754579 | 39429.3 |
| alpha/beta hydrolase | DW150_02920 | Not Available | - | 754579 - 755679 | 40043.6 |
| transcriptional regulator | DW150_02925 | Not Available | - | 755707 - 756204 | 18825.6 |
| arac family transcriptional regulator | DW150_02930 | Not Available | + | 756364 - 757275 | 34656.1 |
| galactoside o-acetyltransferase | DW150_02935 | Not Available | + | 757291 - 757776 | 17818.8 |
| helix-turn-helix domain-containing protein | DW150_02940 | Not Available | - | 757790 - 758596 | 31410.6 |
| aldo/keto reductase | DW150_02945 | Not Available | - | 758799 - 759800 | 37220.6 |
| aldo/keto reductase | DW150_02950 | Not Available | - | 759802 - 760752 | 35264.7 |
| aldo/keto reductase | DW150_02955 | Not Available | + | 760972 - 761811 | 31742.0 |
| duf488 family protein | DW150_02965 | Not Available | + | 762636 - 763535 | 35452.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
