Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| radical sam protein | DW150_02230 | Not Available | + | 580688 - 581986 | 50845.9 |
| hypothetical protein | DW150_02235 | Not Available | + | 581970 - 584249 | 87445.4 |
| duf4491 family protein | DW150_02240 | Not Available | - | 584449 - 584763 | 12155.1 |
| asnc family transcriptional regulator | DW150_02245 | Not Available | - | 584770 - 585228 | 17087.9 |
| hypothetical protein | DW150_02250 | Not Available | - | 585345 - 585728 | 15190.0 |
| hlyc/corc family transporter | DW150_02255 | Not Available | - | 585751 - 587037 | 48001.9 |
| nudix domain-containing protein | DW150_02260 | Not Available | + | 587172 - 587696 | 19814.6 |
| tetratricopeptide repeat protein | DW150_02265 | Not Available | + | 587706 - 590609 | 111214.0 |
| tonb-dependent receptor | DW150_02270 | Not Available | + | 590633 - 592330 | 64350.7 |
| type i dna topoisomerase | DW150_02275 | Not Available | + | 592452 - 594890 | 91403.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
