Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna resolvase | DW150_21835 | Not Available | + | 5201457 - 5202083 | 23695.5 |
| recombinase family protein | DW150_21840 | Not Available | + | 5202447 - 5204012 | 59854.7 |
| Trna-leu | Not Available | Not Available | + | 5203978 - 5204061 | Not Available |
| mannose-1-phosphate guanylyltransferase | DW150_21850 | Not Available | + | 5204246 - 5205289 | 39479.2 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | DW150_21855 | Not Available | - | 5205834 - 5207720 | 72139.1 |
| susc/raga family tonb-linked outer membrane protein | DW150_21860 | Not Available | - | 5207748 - 5211158 | 124776.0 |
| virulence-associated protein e | DW150_21865 | Not Available | - | 5211555 - 5212706 | 45236.6 |
| hypothetical protein | DW150_21870 | Not Available | - | 5212811 - 5213017 | 7958.76 |
| dna-binding protein | DW150_21875 | Not Available | + | 5213019 - 5213606 | 22142.3 |
| oxidoreductase | DW150_21880 | Not Available | - | 5213647 - 5213744 | 3263.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
