Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_21775 | Not Available | - | 5191918 - 5193234 | 47645.0 |
| fimbrillin family protein | DW150_21780 | Not Available | - | 5193231 - 5194226 | 37282.4 |
| aaa family atpase | DW150_21785 | Not Available | - | 5194524 - 5196134 | 62446.3 |
| hypothetical protein | DW150_21790 | Not Available | + | 5196182 - 5196430 | 9695.02 |
| fic family protein | DW150_21800 | Not Available | - | 5197001 - 5197810 | 30847.4 |
| hypothetical protein | DW150_21805 | Not Available | + | 5198396 - 5198587 | 7419.54 |
| hypothetical protein | DW150_21815 | Not Available | - | 5199655 - 5200101 | 16564.3 |
| porin family protein | DW150_21820 | Not Available | - | 5200215 - 5200778 | 20469.4 |
| xre family transcriptional regulator | DW150_21825 | Not Available | + | 5200883 - 5201101 | 8178.07 |
| hypothetical protein | DW150_21830 | Not Available | - | 5201107 - 5201325 | 8332.09 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
