Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sorbitol dehydrogenase | DW150_21670 | Not Available | + | 5163206 - 5164225 | 36738.0 |
| naat family transporter | DW150_21675 | Not Available | - | 5164298 - 5164942 | 23868.2 |
| hypothetical protein | DW150_21680 | Not Available | + | 5165095 - 5165685 | 21739.7 |
| duf2764 domain-containing protein | DW150_21685 | Not Available | + | 5165695 - 5166531 | 32577.0 |
| v-type atp synthase subunit a | DW150_21690 | Not Available | + | 5166550 - 5168304 | 65785.3 |
| v-type atp synthase subunit b | DW150_21695 | Not Available | + | 5168340 - 5169662 | 48182.8 |
| v-type atp synthase subunit d | DW150_21700 | Not Available | + | 5169677 - 5170282 | 23475.8 |
| v-type atp synthase subunit i | DW150_21705 | Not Available | + | 5170279 - 5172084 | 67297.5 |
| v-type atp synthase subunit k | DW150_21710 | Not Available | + | 5172298 - 5172762 | 15421.2 |
| glycosyl transferase | DW150_21715 | Not Available | + | 5173014 - 5174684 | 63550.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
