Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_21490 | Not Available | - | 5114510 - 5114788 | 10073.2 |
| hypothetical protein | DW150_21495 | Not Available | - | 5114785 - 5115504 | 26712.3 |
| hypothetical protein | DW150_21500 | Not Available | - | 5115747 - 5116184 | 17361.5 |
| hypothetical protein | DW150_21505 | Not Available | - | 5116177 - 5117202 | 39022.2 |
| hypothetical protein | DW150_21510 | Not Available | - | 5117209 - 5118264 | 39301.6 |
| atp-binding protein | DW150_21515 | Not Available | + | 5118665 - 5119954 | 49809.8 |
| rlob domain-containing protein | DW150_21520 | Not Available | + | 5119968 - 5120564 | 23413.3 |
| dna-binding protein | DW150_21540 | Not Available | - | 5121675 - 5122028 | 13502.8 |
| xre family transcriptional regulator | DW150_21550 | Not Available | + | 5122845 - 5123084 | 9100.27 |
| hypothetical protein | DW150_21555 | Not Available | + | 5123247 - 5123378 | 4876.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
