Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf5056 domain-containing protein | DW150_21060 | Not Available | + | 5022618 - 5022947 | 12598.6 |
| thymidylate synthase | DW150_21065 | Not Available | + | 5023029 - 5023823 | 30497.4 |
| dihydrofolate reductase | DW150_21070 | Not Available | + | 5023907 - 5024401 | 18893.7 |
| asnc family transcriptional regulator | DW150_21075 | Not Available | - | 5024405 - 5024881 | 17818.5 |
| peptidase m64 | DW150_21080 | Not Available | + | 5024910 - 5026295 | 52395.0 |
| gnat family n-acetyltransferase | DW150_21085 | Not Available | + | 5026317 - 5026853 | 21153.5 |
| biopolymer transporter exbd | DW150_21095 | Not Available | - | 5027041 - 5027505 | 17801.8 |
| biopolymer transporter exbd | DW150_21100 | Not Available | - | 5027505 - 5028095 | 22530.0 |
| hypothetical protein | DW150_21105 | Not Available | - | 5028141 - 5028599 | 16541.8 |
| mota/tolq/exbb proton channel family protein | DW150_21110 | Not Available | - | 5028608 - 5029381 | 27479.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
