Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chromosomal replication initiator protein dnaa | DW150_20940 | Not Available | + | 4992662 - 4994068 | 53559.4 |
| nadph-dependent oxidoreductase | DW150_20945 | Not Available | - | 4994153 - 4994893 | 28380.1 |
| adenosylcobalamin-dependent ribonucleoside-diphosphate reductase | DW150_20950 | Not Available | + | 4995237 - 4997783 | 96404.4 |
| hypothetical protein | DW150_20955 | Not Available | - | 4997876 - 5000848 | 110916.0 |
| dihydroneopterin aldolase | DW150_20960 | Not Available | + | 5001010 - 5001378 | 13777.6 |
| atp-binding protein | DW150_20965 | Not Available | - | 5001563 - 5002105 | 20638.6 |
| dna adenine methylase | DW150_20970 | Not Available | - | 5002102 - 5002962 | 32700.9 |
| is1380 family transposase is616 | DW150_20985 | Not Available | + | 5003293 - 5004639 | 52454.5 |
| hypothetical protein | DW150_20990 | Not Available | - | 5004779 - 5006050 | 48135.7 |
| gnat family n-acetyltransferase | DW150_21000 | Not Available | + | 5007776 - 5008237 | 17857.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
