Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | DW150_20825 | Not Available | - | 4966560 - 4967447 | 33874.1 |
| peptidase | DW150_20830 | Not Available | - | 4967475 - 4968050 | 21781.0 |
| hypothetical protein | DW150_20835 | Not Available | - | 4968034 - 4968618 | 20964.7 |
| hypothetical protein | DW150_20840 | Not Available | - | 4968640 - 4970214 | 58324.1 |
| duf4876 domain-containing protein | DW150_20845 | Not Available | - | 4970229 - 4971443 | 44660.4 |
| tonb-dependent receptor | DW150_20850 | Not Available | - | 4971465 - 4974200 | 103906.0 |
| hypothetical protein | DW150_20855 | Not Available | + | 4974659 - 4974949 | 11313.0 |
| hypothetical protein | DW150_20860 | Not Available | + | 4975048 - 4975413 | 14053.1 |
| abc transporter atp-binding protein | DW150_20865 | Not Available | - | 4975678 - 4977408 | 63854.3 |
| class i sam-dependent methyltransferase | DW150_20870 | Not Available | - | 4977420 - 4978040 | 23243.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
