Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin | DW150_20650 | Not Available | + | 4936686 - 4937273 | 21660.9 |
| flavodoxin family protein | DW150_20655 | Not Available | + | 4937397 - 4937930 | 19610.7 |
| hypothetical protein | DW150_20670 | Not Available | + | 4938811 - 4939704 | 32994.5 |
| flavodoxin | DW150_20675 | Not Available | + | 4939708 - 4940373 | 24705.9 |
| alpha/beta hydrolase | DW150_20685 | Not Available | + | 4941529 - 4942452 | 34314.5 |
| hypothetical protein | DW150_20690 | Not Available | + | 4942466 - 4943014 | 20020.3 |
| iron-containing alcohol dehydrogenase | DW150_20695 | Not Available | + | 4943035 - 4944192 | 41457.8 |
| hypothetical protein | DW150_20700 | Not Available | + | 4944201 - 4945607 | 52113.8 |
| nad(p)-dependent alcohol dehydrogenase | DW150_20705 | Not Available | + | 4945711 - 4946832 | 41266.6 |
| arac family transcriptional regulator | DW150_20710 | Not Available | - | 4946868 - 4947773 | 34511.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
