Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit delta | DW150_20290 | Not Available | - | 4856916 - 4857932 | 38857.2 |
| amp nucleosidase | DW150_20295 | Not Available | - | 4857944 - 4858720 | 29142.2 |
| hypothetical protein | DW150_20300 | Not Available | + | 4858778 - 4859227 | 17607.4 |
| hypothetical protein | DW150_20305 | Not Available | - | 4859333 - 4860124 | 30517.8 |
| nif3-like dinuclear metal center hexameric protein | DW150_20310 | Not Available | - | 4860134 - 4861228 | 40579.8 |
| hypothetical protein | DW150_20315 | Not Available | - | 4861290 - 4861568 | 10823.3 |
| abc transporter permease | DW150_20320 | Not Available | - | 4861618 - 4862415 | 29562.7 |
| atp-binding cassette domain-containing protein | DW150_20325 | Not Available | - | 4862424 - 4863044 | 22783.9 |
| proline--trna ligase | DW150_20330 | Not Available | - | 4863128 - 4864618 | 56833.0 |
| hypothetical protein | DW150_20335 | Not Available | - | 4864733 - 4865884 | 44047.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
