Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_20030 | Not Available | - | 4783109 - 4785148 | 79639.5 |
| alpha-l-fucosidase | DW150_20035 | Not Available | - | 4785167 - 4786516 | 51875.6 |
| dna/rna non-specific endonuclease | DW150_20040 | Not Available | + | 4786641 - 4787498 | 32304.8 |
| alpha-n-arabinofuranosidase | DW150_20045 | Not Available | - | 4787588 - 4789111 | 57400.6 |
| endolytic transglycosylase mltg | DW150_20050 | Not Available | + | 4789310 - 4790344 | 39577.8 |
| hypothetical protein | DW150_20055 | Not Available | + | 4790423 - 4793014 | 93570.2 |
| hypothetical protein | DW150_20060 | Not Available | - | 4793145 - 4793492 | 13604.0 |
| hypothetical protein | DW150_20065 | Not Available | - | 4793568 - 4796867 | 122627.0 |
| 4fe-4s dicluster domain-containing protein | DW150_20075 | Not Available | + | 4798066 - 4798845 | 28502.2 |
| trna 2-thiouridine(34) synthase mnma | DW150_20080 | Not Available | + | 4798845 - 4799972 | 42799.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
