Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase | DW150_19815 | Not Available | - | 4743038 - 4744281 | 47394.1 |
| hepn domain-containing protein | DW150_19820 | Not Available | - | 4744549 - 4744953 | 15592.8 |
| nucleotidyltransferase domain-containing protein | DW150_19825 | Not Available | - | 4744947 - 4745270 | 12720.5 |
| hypothetical protein | DW150_19830 | Not Available | - | 4745757 - 4746080 | 13031.8 |
| hypothetical protein | DW150_19835 | Not Available | - | 4746100 - 4746912 | 31104.4 |
| nad(p)-dependent oxidoreductase | DW150_19840 | Not Available | - | 4746918 - 4747934 | 37899.1 |
| glycosyltransferase family 4 protein | DW150_19845 | Not Available | - | 4747941 - 4749056 | 42872.5 |
| glycosyltransferase | DW150_19850 | Not Available | - | 4749053 - 4750135 | 41021.9 |
| hypothetical protein | DW150_19855 | Not Available | - | 4750238 - 4751455 | 47016.2 |
| is66 family transposase | DW150_19860 | Not Available | - | 4751760 - 4753463 | 65593.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
