Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fpra family a-type flavoprotein | DW150_19655 | Not Available | - | 4706535 - 4707722 | 44694.8 |
| tigr01212 family radical sam protein | DW150_19660 | Not Available | - | 4707738 - 4708664 | 35506.7 |
| s9 family peptidase | DW150_19665 | Not Available | + | 4708751 - 4710952 | 83389.0 |
| lipoyl synthase | DW150_19670 | Not Available | + | 4711052 - 4711906 | 31722.2 |
| hypothetical protein | DW150_19675 | Not Available | + | 4711964 - 4712953 | 37740.0 |
| sam-dependent methyltransferase | DW150_19680 | Not Available | - | 4712969 - 4713673 | 26039.0 |
| gliding motility lipoprotein gldb | DW150_19685 | Not Available | - | 4713697 - 4714698 | 38889.3 |
| enoyl-acp reductase | DW150_19690 | Not Available | - | 4714706 - 4715563 | 31326.5 |
| glycoside hydrolase family 28 protein | DW150_19695 | Not Available | + | 4715940 - 4717559 | 59182.7 |
| duf4861 domain-containing protein | DW150_19700 | Not Available | + | 4717698 - 4718912 | 45704.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
