Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| argininosuccinate synthase | DW150_19145 | Not Available | + | 4557131 - 4558339 | 45126.7 |
| n-acetyl-gamma-glutamyl-phosphate reductase | DW150_19150 | Not Available | + | 4558345 - 4559313 | 35942.4 |
| aminotransferase class iii-fold pyridoxal phosphate-dependent enzyme | DW150_19155 | Not Available | + | 4559327 - 4560451 | 41022.9 |
| pyrroline-5-carboxylate reductase | DW150_19160 | Not Available | + | 4560635 - 4561408 | 27247.4 |
| arac family transcriptional regulator | DW150_19165 | Not Available | + | 4561591 - 4562481 | 34355.3 |
| hypothetical protein | DW150_19170 | Not Available | - | 4562474 - 4562704 | 9105.75 |
| glycoside hydrolase | DW150_19175 | Not Available | + | 4562814 - 4564328 | 55682.5 |
| tonb-dependent receptor | DW150_19180 | Not Available | + | 4565159 - 4568188 | 110554.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW150_19185 | Not Available | + | 4568215 - 4569981 | 67623.4 |
| aryl-sulfate sulfotransferase | DW150_19190 | Not Available | + | 4570054 - 4571853 | 68405.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
