Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_18825 | Not Available | + | 4480513 - 4482744 | 83491.5 |
| transposase | DW150_18830 | Not Available | + | 4482865 - 4483170 | 11667.1 |
| hypothetical protein | DW150_18835 | Not Available | + | 4483208 - 4483864 | 26363.5 |
| hypothetical protein | DW150_18840 | Not Available | + | 4483861 - 4484043 | 6797.21 |
| hypothetical protein | DW150_18845 | Not Available | + | 4484040 - 4484234 | 7401.92 |
| hypothetical protein | DW150_18850 | Not Available | + | 4484265 - 4484561 | 11503.9 |
| atp-binding protein | DW150_18855 | Not Available | - | 4484728 - 4486224 | 58935.9 |
| tetratricopeptide repeat protein | DW150_18860 | Not Available | - | 4486214 - 4490506 | 161661.0 |
| hypothetical protein | DW150_18865 | Not Available | - | 4490734 - 4492077 | 52790.7 |
| hypothetical protein | DW150_18870 | Not Available | - | 4492074 - 4494191 | 82438.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
