Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mate family efflux transporter | DW150_18660 | Not Available | + | 4441336 - 4442706 | 49500.2 |
| cytidylate kinase-like family protein | DW150_18665 | Not Available | + | 4442760 - 4443389 | 23564.2 |
| hypothetical protein | DW150_18670 | Not Available | + | 4443619 - 4443852 | 8819.8 |
| hypothetical protein | DW150_18675 | Not Available | + | 4444063 - 4444365 | 11784.6 |
| hypothetical protein | DW150_18680 | Not Available | + | 4445123 - 4445344 | 8511.09 |
| adenine nucleotide alpha hydrolase family protein | DW150_18685 | Not Available | - | 4446041 - 4446796 | 29125.7 |
| hypothetical protein | DW150_18690 | Not Available | + | 4446940 - 4448349 | 54177.8 |
| nodulation efficiency protein d (nfed) | DW150_18695 | Not Available | + | 4448363 - 4448833 | 17112.5 |
| upf0365 family protein | DW150_18700 | Not Available | + | 4448975 - 4449976 | 36124.0 |
| phosphorylase | DW150_18705 | Not Available | + | 4450170 - 4451048 | 32797.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
