Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_18560 | Not Available | + | 4420316 - 4420708 | 15151.0 |
| duf3440 domain-containing protein | DW150_18565 | Not Available | + | 4420701 - 4422002 | 52313.9 |
| chromosome partitioning protein parb | DW150_18570 | Not Available | + | 4421999 - 4422511 | 19744.9 |
| hypothetical protein | DW150_18575 | Not Available | + | 4422539 - 4424323 | 65271.9 |
| malate dehydrogenase | DW150_18580 | Not Available | - | 4424421 - 4425362 | 32849.0 |
| hypothetical protein | DW150_18585 | Not Available | + | 4425519 - 4426391 | 33451.4 |
| tolc family protein | DW150_18590 | Not Available | + | 4426607 - 4428070 | 53480.7 |
| biotin/lipoyl-binding protein | DW150_18595 | Not Available | + | 4428097 - 4429083 | 35945.9 |
| abc transporter permease | DW150_18600 | Not Available | + | 4429090 - 4430265 | 44243.0 |
| abc transporter permease | DW150_18605 | Not Available | + | 4430280 - 4431530 | 47511.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
