Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mboat family protein | DW150_18460 | Not Available | - | 4389536 - 4391017 | 57278.7 |
| hypothetical protein | DW150_18465 | Not Available | - | 4390995 - 4391957 | 35954.6 |
| hypothetical protein | DW150_18470 | Not Available | - | 4391944 - 4393311 | 50814.9 |
| hypothetical protein | DW150_18475 | Not Available | - | 4393448 - 4393741 | 11224.5 |
| acrb/acrd/acrf family protein | DW150_18480 | Not Available | - | 4393814 - 4396984 | 115812.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW150_18485 | Not Available | - | 4397066 - 4398088 | 37601.9 |
| tolc family protein | DW150_18490 | Not Available | - | 4398112 - 4399437 | 49661.7 |
| tetr/acrr family transcriptional regulator | DW150_18495 | Not Available | - | 4399474 - 4400127 | 25425.8 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | DW150_18500 | Not Available | - | 4400156 - 4400923 | 27506.9 |
| tolc family protein | DW150_18505 | Not Available | - | 4400947 - 4402332 | 50395.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
