Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_01760 | Not Available | + | 475014 - 475268 | 9453.2 |
| atp-dependent helicase | DW150_01765 | Not Available | - | 475632 - 476909 | 47471.2 |
| phosphoserine phosphatase serb | DW150_01770 | Not Available | - | 476930 - 478162 | 46069.1 |
| hypothetical protein | DW150_01775 | Not Available | + | 478435 - 478929 | 18414.2 |
| had family phosphatase | DW150_01780 | Not Available | + | 479088 - 479708 | 23514.0 |
| yjgp/yjgq family permease | DW150_01785 | Not Available | - | 479709 - 480881 | 45459.9 |
| trna guanosine(34) transglycosylase tgt | DW150_01790 | Not Available | - | 480892 - 482022 | 42655.5 |
| endopeptidase la | DW150_01795 | Not Available | - | 482025 - 484502 | 92635.5 |
| methyltransferase domain-containing protein | DW150_01800 | Not Available | + | 484684 - 485388 | 26347.6 |
| diacylglycerol kinase family lipid kinase | DW150_01805 | Not Available | - | 485469 - 486503 | 38063.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
