Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| endonuclease muts2 | DW150_18045 | Not Available | - | 4292785 - 4295289 | 95135.6 |
| Trna-ser | Not Available | Not Available | + | 4295436 - 4295523 | Not Available |
| macrolide efflux mfs transporter mef(en2) | DW150_18055 | Not Available | + | 4295848 - 4297053 | 44165.4 |
| lincosamide nucleotidyltransferase lnu(an2) | DW150_18060 | Not Available | + | 4297078 - 4297590 | 19690.2 |
| hypothetical protein | DW150_18065 | Not Available | + | 4297775 - 4297966 | 7140.64 |
| steroid delta-isomerase | DW150_18070 | Not Available | - | 4298038 - 4298391 | 13706.5 |
| mobilization protein | DW150_18075 | Not Available | - | 4298480 - 4299883 | 54847.8 |
| dna primase | DW150_18080 | Not Available | - | 4300095 - 4301051 | 36698.6 |
| mobilization protein | DW150_18085 | Not Available | - | 4301264 - 4302340 | 41122.6 |
| duf3853 family protein | DW150_18090 | Not Available | - | 4302355 - 4302663 | 11401.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
