Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna lysidine(34) synthetase tils | DW150_17790 | Not Available | - | 4237396 - 4238700 | 50081.6 |
| ferrous iron transport protein b | DW150_17795 | Not Available | + | 4238821 - 4241289 | 92779.5 |
| Trna-cys | Not Available | Not Available | + | 4241601 - 4241675 | Not Available |
| hypothetical protein | DW150_17805 | Not Available | - | 4241971 - 4242288 | 11897.5 |
| helicase dnab | DW150_17810 | Not Available | - | 4242317 - 4243153 | 31745.5 |
| hypothetical protein | DW150_17815 | Not Available | - | 4243328 - 4244836 | 58310.1 |
| hypothetical protein | DW150_17820 | Not Available | - | 4244877 - 4246151 | 48033.1 |
| duf1643 domain-containing protein | DW150_17825 | Not Available | - | 4246156 - 4246797 | 24460.1 |
| xre family transcriptional regulator | DW150_17830 | Not Available | + | 4246883 - 4247116 | 8752.37 |
| hypothetical protein | DW150_17835 | Not Available | - | 4247256 - 4247951 | 26958.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
