Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribose-phosphate pyrophosphokinase | DW150_17610 | Not Available | + | 4196145 - 4197062 | 33387.5 |
| extracellular solute-binding protein | DW150_17615 | Not Available | - | 4197192 - 4198502 | 50243.2 |
| abc transporter permease | DW150_17620 | Not Available | - | 4198530 - 4199321 | 28704.2 |
| abc transporter permease | DW150_17625 | Not Available | - | 4199315 - 4200088 | 28432.5 |
| polyamine abc transporter atp-binding protein | DW150_17630 | Not Available | - | 4200125 - 4201519 | 52055.5 |
| ahpc/tsa family protein | DW150_17645 | Not Available | + | 4202330 - 4203421 | 40163.9 |
| glycoside hydrolase family 2 | DW150_17655 | Not Available | - | 4204302 - 4206926 | 98273.5 |
| hypothetical protein | DW150_17660 | Not Available | + | 4207001 - 4207225 | 8638.03 |
| hypothetical protein | DW150_17670 | Not Available | + | 4207663 - 4207872 | 8227.15 |
| tonb-dependent receptor | DW150_17675 | Not Available | - | 4208200 - 4210476 | 85583.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
