Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-gly | Not Available | Not Available | + | 4181632 - 4181704 | Not Available |
| Trna-leu | Not Available | Not Available | + | 4181718 - 4181804 | Not Available |
| Trna-leu | Not Available | Not Available | + | 4181825 - 4181908 | Not Available |
| Trna-gly | Not Available | Not Available | + | 4181956 - 4182028 | Not Available |
| Trna-leu | Not Available | Not Available | + | 4182041 - 4182124 | Not Available |
| Trna-gly | Not Available | Not Available | + | 4182172 - 4182244 | Not Available |
| carboxynorspermidine decarboxylase | DW150_17540 | Not Available | - | 4182418 - 4183581 | 44371.1 |
| atp-dependent dna helicase | DW150_17545 | Not Available | - | 4183614 - 4186004 | 91452.8 |
| superoxide dismutase | DW150_17550 | Not Available | + | 4186113 - 4186730 | 23296.6 |
| sulfur carrier protein this | DW150_17555 | Not Available | + | 4187116 - 4187316 | 7153.82 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
