Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type iv secretion protein rhs | DW150_17100 | Not Available | - | 4072912 - 4074117 | 46609.2 |
| rpn family recombination-promoting nuclease/putative transposase | DW150_17105 | Not Available | - | 4074118 - 4074434 | 12510.9 |
| hypothetical protein | DW150_17110 | Not Available | - | 4074557 - 4075429 | 33591.9 |
| glycosyltransferase | DW150_17115 | Not Available | - | 4075441 - 4076568 | 43341.1 |
| glycosyltransferase family 2 protein | DW150_17120 | Not Available | - | 4076924 - 4077622 | 26815.4 |
| glycosyltransferase | DW150_17125 | Not Available | - | 4077619 - 4078341 | 28128.7 |
| hypothetical protein | DW150_17130 | Not Available | - | 4078334 - 4079527 | 46912.5 |
| hypothetical protein | DW150_17135 | Not Available | - | 4079621 - 4080592 | 38123.2 |
| glycosyltransferase family 1 protein | DW150_17140 | Not Available | - | 4080582 - 4081916 | 51375.2 |
| hypothetical protein | DW150_17145 | Not Available | - | 4081937 - 4082986 | 41238.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
