Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_17045 | Not Available | + | 4059965 - 4060537 | 22059.7 |
| hypothetical protein | DW150_17050 | Not Available | - | 4060677 - 4061030 | 13166.5 |
| hypothetical protein | DW150_17055 | Not Available | - | 4061050 - 4061535 | 18395.3 |
| duf4065 domain-containing protein | DW150_17060 | Not Available | - | 4061541 - 4062098 | 21054.3 |
| dna methylase | DW150_17070 | Not Available | + | 4062700 - 4067679 | 189364.0 |
| ntpase | DW150_17075 | Not Available | - | 4067921 - 4069810 | 73039.9 |
| hypothetical protein | DW150_17080 | Not Available | - | 4069821 - 4070054 | 8787.96 |
| hypothetical protein | DW150_17085 | Not Available | - | 4070033 - 4070422 | 14781.8 |
| frg domain-containing protein | DW150_17090 | Not Available | - | 4070755 - 4072245 | 57595.6 |
| hypothetical protein | DW150_17095 | Not Available | - | 4072325 - 4072915 | 22811.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
