Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| m23 family peptidase | DW150_16985 | Not Available | + | 4054411 - 4055070 | 24159.7 |
| orotate phosphoribosyltransferase | DW150_16990 | Not Available | - | 4055103 - 4055939 | 32633.0 |
| hypothetical protein | DW150_16995 | Not Available | - | 4056073 - 4056231 | 6423.01 |
| hypothetical protein | DW150_17000 | Not Available | + | 4056245 - 4056475 | 8439.34 |
| hypothetical protein | DW150_17005 | Not Available | + | 4056476 - 4056643 | 6396.83 |
| ribonucleotide-diphosphate reductase subunit alpha | DW150_17010 | Not Available | + | 4056936 - 4057502 | 21419.5 |
| duf1273 family protein | DW150_17015 | Not Available | + | 4057504 - 4058007 | 18851.7 |
| hypothetical protein | DW150_17020 | Not Available | + | 4058120 - 4058296 | 6585.39 |
| deaminase | DW150_17025 | Not Available | - | 4058349 - 4058834 | 17483.0 |
| hypothetical protein | DW150_17030 | Not Available | - | 4059014 - 4059214 | 7602.21 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
