Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_16885 | Not Available | + | 4036160 - 4036645 | 18875.2 |
| hypothetical protein | DW150_16890 | Not Available | + | 4037077 - 4037271 | 7464.04 |
| hypothetical protein | DW150_16895 | Not Available | + | 4037276 - 4037560 | 11212.5 |
| hypothetical protein | DW150_16900 | Not Available | + | 4037571 - 4037942 | 13913.6 |
| duf1738 domain-containing protein | DW150_16905 | Not Available | - | 4037997 - 4039679 | 64562.3 |
| hypothetical protein | DW150_16910 | Not Available | - | 4039685 - 4040296 | 22991.4 |
| hypothetical protein | DW150_16915 | Not Available | - | 4040379 - 4040555 | 6671.7 |
| glucosaminidase | DW150_16920 | Not Available | - | 4040568 - 4042124 | 57478.6 |
| duf1738 domain-containing protein | DW150_16925 | Not Available | - | 4042136 - 4044334 | 84297.8 |
| hypothetical protein | DW150_16930 | Not Available | - | 4044405 - 4046189 | 66272.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
