Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_16825 | Not Available | + | 4028488 - 4028940 | 17525.0 |
| hypothetical protein | DW150_16830 | Not Available | + | 4028975 - 4029346 | 14750.0 |
| hypothetical protein | DW150_16835 | Not Available | + | 4029343 - 4029900 | 21194.3 |
| marr family transcriptional regulator | DW150_16840 | Not Available | + | 4029919 - 4030785 | 32689.1 |
| recombinase | DW150_16845 | Not Available | + | 4030992 - 4032449 | 55477.1 |
| hypothetical protein | DW150_16850 | Not Available | + | 4032503 - 4033945 | 53827.0 |
| histone h1 | DW150_16855 | Not Available | - | 4034075 - 4034248 | 6594.04 |
| hypothetical protein | DW150_16865 | Not Available | + | 4034718 - 4035188 | 17614.4 |
| hypothetical protein | DW150_16870 | Not Available | + | 4035364 - 4035720 | 14027.1 |
| hypothetical protein | DW150_16880 | Not Available | - | 4035905 - 4036144 | 9288.25 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
