Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| single-stranded dna-binding protein | DW150_16765 | Not Available | + | 4021186 - 4021566 | 14495.4 |
| hypothetical protein | DW150_16770 | Not Available | + | 4022054 - 4022581 | 20408.4 |
| hypothetical protein | DW150_16780 | Not Available | + | 4023048 - 4023362 | 12769.8 |
| hypothetical protein | DW150_16785 | Not Available | + | 4023404 - 4023694 | 10983.5 |
| duf4313 domain-containing protein | DW150_16790 | Not Available | + | 4023781 - 4024281 | 19301.5 |
| hypothetical protein | DW150_16795 | Not Available | + | 4024772 - 4025026 | 10115.0 |
| hypothetical protein | DW150_16805 | Not Available | + | 4025498 - 4026178 | 26405.8 |
| hypothetical protein | DW150_16810 | Not Available | - | 4026128 - 4026283 | 6327.86 |
| recombinase family protein | DW150_16815 | Not Available | - | 4026547 - 4027191 | 24309.1 |
| hypothetical protein | DW150_16820 | Not Available | + | 4027427 - 4028476 | 40610.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
