Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methionine synthase | DW150_16715 | Not Available | - | 4012960 - 4015713 | 100923.0 |
| ssra-binding protein | DW150_16720 | Not Available | - | 4015751 - 4016203 | 17572.4 |
| duf1282 domain-containing protein | DW150_16725 | Not Available | - | 4016203 - 4016772 | 21095.2 |
| recombinase | DW150_16730 | Not Available | + | 4017147 - 4018235 | 41795.1 |
| hypothetical protein | DW150_16735 | Not Available | - | 4019027 - 4019326 | 11718.3 |
| hypothetical protein | DW150_16740 | Not Available | + | 4019398 - 4019700 | 11971.8 |
| molybdenum abc transporter atp-binding protein | DW150_16745 | Not Available | + | 4019883 - 4020212 | 13134.9 |
| hypothetical protein | DW150_16750 | Not Available | + | 4020227 - 4020487 | 10446.6 |
| hypothetical protein | DW150_16755 | Not Available | - | 4020481 - 4020702 | 8662.49 |
| hypothetical protein | DW150_16760 | Not Available | + | 4020881 - 4021189 | 12123.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
