Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_16650 | Not Available | + | 4000254 - 4000529 | 11052.4 |
| hypothetical protein | DW150_16655 | Not Available | + | 4000553 - 4002346 | 68711.4 |
| hypothetical protein | DW150_16670 | Not Available | + | 4004168 - 4005205 | 39583.0 |
| is256 family transposase | DW150_16675 | Not Available | + | 4005308 - 4006486 | 44790.3 |
| hypothetical protein | DW150_16680 | Not Available | - | 4006824 - 4007111 | 10802.2 |
| hypothetical protein | DW150_16690 | Not Available | - | 4007807 - 4008130 | 11743.4 |
| xanthine phosphoribosyltransferase | DW150_16695 | Not Available | + | 4008486 - 4009052 | 20888.7 |
| purine permease | DW150_16700 | Not Available | + | 4009057 - 4010388 | 46725.4 |
| phosphotransferase | DW150_16705 | Not Available | + | 4010491 - 4011921 | 55626.3 |
| nucleotidyltransferase family protein | DW150_16710 | Not Available | + | 4011918 - 4012772 | 32624.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
