Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_01500 | Not Available | + | 418708 - 419031 | 12131.6 |
| rna methyltransferase | DW150_01505 | Not Available | - | 419103 - 419858 | 27919.9 |
| hypothetical protein | DW150_01510 | Not Available | + | 419960 - 422284 | 88971.3 |
| hypothetical protein | DW150_01515 | Not Available | + | 422301 - 422549 | 9624.58 |
| hypothetical protein | DW150_01520 | Not Available | + | 422602 - 423186 | 21974.4 |
| hypothetical protein | DW150_01525 | Not Available | + | 423648 - 423866 | 8539.51 |
| Trna-lys | Not Available | Not Available | + | 423999 - 424074 | Not Available |
| Trna-lys | Not Available | Not Available | + | 424092 - 424167 | Not Available |
| Trna-lys | Not Available | Not Available | + | 424190 - 424265 | Not Available |
| mbl fold metallo-hydrolase | DW150_01545 | Not Available | - | 424354 - 425157 | 29855.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
