Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW150_01150 | Not Available | + | 335010 - 335423 | 16427.0 |
| atp synthase f0 subunit a | DW150_01155 | Not Available | + | 335425 - 336516 | 40589.3 |
| atp synthase f0 subunit c | DW150_01160 | Not Available | + | 336548 - 336802 | 8151.6 |
| atp synthase subunit b | DW150_01165 | Not Available | + | 336813 - 337313 | 18885.0 |
| f0f1 atp synthase subunit delta | DW150_01170 | Not Available | + | 337319 - 337876 | 21019.8 |
| atp synthase subunit alpha | DW150_01175 | Not Available | + | 337998 - 339590 | 57717.7 |
| f0f1 atp synthase subunit gamma | DW150_01180 | Not Available | + | 339593 - 340462 | 32532.7 |
| class i sam-dependent methyltransferase | DW150_01185 | Not Available | - | 340550 - 341284 | 27872.3 |
| atpase | DW150_01190 | Not Available | + | 341535 - 343157 | 62373.6 |
| vwa domain-containing protein | DW150_01195 | Not Available | + | 343129 - 344442 | 51531.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
