Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola vulgatus strain AM13-21
Accession NumberQRLF00000000.1
Gene Summary
Adenine Count
1539821 bp
Thymine Count
1499100 bp
Guanine Count
1070173 bp
Cytosine Count
1133878 bp
Genome Length
5243870 bp
Protein-coding Genes
4129 genes
Non-Coding Genes
75 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | DW150_01040 | Not Available | + | 311889 - 312425 | 20476.6 |
| yqge/algh family protein | DW150_01045 | Not Available | - | 312418 - 313008 | 22412.9 |
| hypothetical protein | DW150_01050 | Not Available | + | 313064 - 313261 | 7902.13 |
| Trna-asp | Not Available | Not Available | + | 313239 - 313312 | Not Available |
| glycoside hydrolase family 95 protein | DW150_01070 | Not Available | + | 314659 - 317118 | 91846.3 |
| iron-sulfur cluster repair di-iron protein | DW150_01075 | Not Available | - | 317198 - 317929 | 27866.1 |
| hydroxylamine reductase | DW150_01080 | Not Available | - | 317941 - 319599 | 61286.5 |
| crp/fnr family transcriptional regulator | DW150_01085 | Not Available | + | 319714 - 320304 | 22004.2 |
| arylsulfatase | DW150_01090 | Not Available | - | 320589 - 322136 | 56965.5 |
| hypothetical protein | DW150_01095 | Not Available | + | 322628 - 323365 | 27752.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
