Bacteroides caccae strain AM16-49B

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Bacteroides

Description

Bacteroides caccae strain AM16-49B is a Gram-negative, anaerobic bacterium characterized by its inability to survive in the presence of oxygen. This strain is part of the Bacteroides genus, which is commonly found in the intestines of humans and animals, playing a crucial role in the digestion of complex carbohydrates. The anaerobic nature of Bacteroides caccae strain AM16-49B suggests it thrives in low-oxygen environments, such as the gastrointestinal tract, where it likely contributes to the fermentation processes that produce short-chain fatty acids, essential for host health. The Gram-negative cell wall structure of this strain is notable for its thin peptidoglycan layer, which is surrounded by an outer membrane containing lipopolysaccharides. This unique cell wall composition can influence its interactions with the host's immune system and may affect its ecological niche within the gut microbiome. The metabolic capabilities of Bacteroides caccae strain AM16-49B may enable it to exploit a variety of substrates, thereby enhancing the microbial diversity and stability of the gut ecosystem. Understanding the specific traits of Bacteroides caccae strain AM16-49B provides insight into its potential role in maintaining gut health, as well as its contribution to the overall balance of microbial communities within the intestinal environment. Its anaerobic metabolism underscores the importance of microbial adaptation to low-oxygen niches, highlighting the complex interplay between gut bacteria and their host.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusBacteroides
SpeciesBacteroides caccae
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatgastrointestinal tract; gut; intestinal
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityHuman

Genome Summary

Bacteroides caccae strain AM16-49B

Accession NumberQRKD00000000.1

Gene Summary

Adenine Count

1578818 bp

Thymine Count

1572359 bp

Guanine Count

1151531 bp

Cytosine Count

1188309 bp

Genome Length

5491859 bp

Protein-coding Genes

4414 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
translation initiation factorDW190_00160Not Available-37155 - 3750512901.5
redox-sensing transcriptional repressor rexDW190_00165Not Available+37671 - 3832124264.3
faa hydrolase family proteinDW190_00170Not Available+38322 - 3893623114.9
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseDW190_00175Not Available+38975 - 3945717363.2
metallophosphataseDW190_00180Not Available+39478 - 4048537717.0
hypothetical proteinDW190_00185Not Available-40475 - 4133833223.1
tonb family proteinDW190_00190Not Available+42336 - 4319932275.3
trna 2-thiouridine(34) synthase mnmaDW190_00195Not Available+43353 - 4443841144.5
serine proteaseDW190_00200Not Available+44461 - 4582549820.6
exodeoxyribonuclease vii large subunitDW190_00205Not Available+45828 - 4705745765.1

Displaying genes 51 – 60 of 4497 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites