Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gastrointestinal tract; gut microbiomes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parabacteroides merdae strain AM16-50
Accession NumberQRKC00000000.1
Gene Summary
Adenine Count
1246323 bp
Thymine Count
1262000 bp
Guanine Count
1062193 bp
Cytosine Count
1024627 bp
Genome Length
4595261 bp
Protein-coding Genes
3646 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | DW191_00175 | Not Available | + | 42370 - 42633 | 10113.9 |
| glucosamine-6-phosphate deaminase | DW191_00180 | Not Available | - | 42703 - 43515 | 29669.6 |
| fpra family a-type flavoprotein | DW191_00185 | Not Available | - | 43590 - 44786 | 45109.0 |
| prolipoprotein diacylglyceryl transferase | DW191_00190 | Not Available | - | 44823 - 45656 | 31898.6 |
| diaminopimelate dehydrogenase | DW191_00195 | Not Available | - | 45752 - 46648 | 32343.2 |
| hypothetical protein | DW191_00200 | Not Available | + | 46809 - 47003 | 7278.52 |
| duf1735 domain-containing protein | DW191_00210 | Not Available | - | 47304 - 48632 | 48689.9 |
| ragb/susd family nutrient uptake outer membrane protein | DW191_00215 | Not Available | - | 48650 - 50638 | 75365.6 |
| tonb-dependent receptor | DW191_00220 | Not Available | - | 50666 - 53824 | 117525.0 |
| tonb-dependent receptor | DW191_00225 | Not Available | + | 54520 - 57000 | 92711.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
