Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gastrointestinal tract; gut microbiomes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parabacteroides merdae strain AM16-50
Accession NumberQRKC00000000.1
Gene Summary
Adenine Count
1246323 bp
Thymine Count
1262000 bp
Guanine Count
1062193 bp
Cytosine Count
1024627 bp
Genome Length
4595261 bp
Protein-coding Genes
3646 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein translocase subunit secdf | DW191_00120 | Not Available | - | 28537 - 31551 | 109792.0 |
| duf4468 domain-containing protein | DW191_00125 | Not Available | + | 31716 - 32717 | 36735.6 |
| duf4468 domain-containing protein | DW191_00130 | Not Available | + | 32719 - 33273 | 20886.2 |
| endonuclease | DW191_00135 | Not Available | - | 33359 - 34480 | 42560.5 |
| rhomboid family intramembrane serine protease | DW191_00140 | Not Available | - | 34477 - 35355 | 33408.4 |
| rhomboid family intramembrane serine protease | DW191_00145 | Not Available | - | 35336 - 36046 | 26625.1 |
| hu family dna-binding protein | DW191_00150 | Not Available | + | 36233 - 36505 | 9594.68 |
| arginine--trna ligase | DW191_00155 | Not Available | + | 36688 - 38481 | 67460.2 |
| class i sam-dependent methyltransferase | DW191_00160 | Not Available | + | 38499 - 39263 | 29196.5 |
| type i dna topoisomerase | DW191_00170 | Not Available | - | 39875 - 42220 | 88047.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
