Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gastrointestinal tract; gut microbiomes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parabacteroides merdae strain AM16-50
Accession NumberQRKC00000000.1
Gene Summary
Adenine Count
1246323 bp
Thymine Count
1262000 bp
Guanine Count
1062193 bp
Cytosine Count
1024627 bp
Genome Length
4595261 bp
Protein-coding Genes
3646 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Putative phage major tail protein | DW191_19190 | Not Available | + | 4537834 - 4538292 | 16637.5 |
| hypothetical protein | DW191_19195 | Not Available | + | 4538289 - 4538606 | 12230.7 |
| hypothetical protein | DW191_19200 | Not Available | + | 4538636 - 4538923 | 11193.5 |
| 1_nc_021795: putative tail length tape measure protein | DW191_19205 | Not Available | + | 4538910 - 4540769 | 67964.8 |
| 1_nc_021802: structural protein | DW191_19210 | Not Available | + | 4540766 - 4542817 | 77937.7 |
| Long tail fiber distal subunit | DW191_19215 | Not Available | + | 4542850 - 4545150 | 81868.4 |
| Attr | Not Available | Not Available | + | 4559480 - 4559491 | Not Available |
| rna polymerase sigma-70 factor | DW191_00005 | Not Available | + | 764 - 1339 | 23027.6 |
| duf4974 domain-containing protein | DW191_00010 | Not Available | + | 1470 - 2396 | 35170.8 |
| susc/raga family tonb-linked outer membrane protein | DW191_00015 | Not Available | + | 2508 - 5855 | 124894.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
