Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gastrointestinal tract; gut microbiomes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parabacteroides merdae strain AM16-50
Accession NumberQRKC00000000.1
Gene Summary
Adenine Count
1246323 bp
Thymine Count
1262000 bp
Guanine Count
1062193 bp
Cytosine Count
1024627 bp
Genome Length
4595261 bp
Protein-coding Genes
3646 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4924 family protein | DW191_01685 | Not Available | - | 438963 - 439511 | 21393.2 |
| udp-n-acetylmuramate--alanine ligase | DW191_01690 | Not Available | - | 439508 - 440434 | 34875.1 |
| mbl fold metallo-hydrolase | DW191_01695 | Not Available | + | 440533 - 441384 | 32039.2 |
| dabb family protein | DW191_01700 | Not Available | + | 441496 - 441882 | 14267.2 |
| beta-n-acetylhexosaminidase | DW191_01705 | Not Available | + | 441920 - 444244 | 86086.0 |
| s9 family peptidase | DW191_01710 | Not Available | + | 444364 - 446832 | 92637.3 |
| hypothetical protein | DW191_01715 | Not Available | - | 447140 - 451048 | 144022.0 |
| alkyl hydroperoxide reductase subunit f | DW191_01725 | Not Available | - | 452145 - 453710 | 55215.1 |
| peroxiredoxin | DW191_01730 | Not Available | - | 453715 - 454281 | 21039.2 |
| duf4884 domain-containing protein | DW191_01735 | Not Available | + | 454572 - 454862 | 11029.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
