Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gastrointestinal tract; gut microbiomes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parabacteroides merdae strain AM16-50
Accession NumberQRKC00000000.1
Gene Summary
Adenine Count
1246323 bp
Thymine Count
1262000 bp
Guanine Count
1062193 bp
Cytosine Count
1024627 bp
Genome Length
4595261 bp
Protein-coding Genes
3646 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4466 domain-containing protein | DW191_01580 | Not Available | - | 414746 - 415738 | 36524.2 |
| hypothetical protein | DW191_01585 | Not Available | - | 415754 - 416257 | 18943.9 |
| ragb/susd family nutrient uptake outer membrane protein | DW191_01590 | Not Available | - | 416275 - 418164 | 71214.5 |
| susc/raga family tonb-linked outer membrane protein | DW191_01595 | Not Available | - | 418176 - 421583 | 127579.0 |
| duf4974 domain-containing protein | DW191_01600 | Not Available | - | 421740 - 422777 | 39525.6 |
| rna polymerase sigma-70 factor | DW191_01605 | Not Available | + | 422979 - 423533 | 21985.3 |
| tonb-dependent receptor | DW191_01610 | Not Available | + | 423782 - 426598 | 104382.0 |
| rhomboid family intramembrane serine protease | DW191_01615 | Not Available | - | 426621 - 427220 | 22332.5 |
| cardiolipin synthase | DW191_01620 | Not Available | + | 427377 - 428816 | 54894.5 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | DW191_01625 | Not Available | - | 428788 - 429345 | 20984.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
