Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gastrointestinal tract; gut microbiomes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parabacteroides merdae strain AM16-50
Accession NumberQRKC00000000.1
Gene Summary
Adenine Count
1246323 bp
Thymine Count
1262000 bp
Guanine Count
1062193 bp
Cytosine Count
1024627 bp
Genome Length
4595261 bp
Protein-coding Genes
3646 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | DW191_00690 | Not Available | + | 180056 - 181510 | 54869.5 |
| dihydrodipicolinate synthase family protein | DW191_00695 | Not Available | + | 181520 - 182458 | 35372.7 |
| exo-alpha-sialidase | DW191_00700 | Not Available | + | 182480 - 183607 | 42021.9 |
| iduronate-2-sulfatase | DW191_00705 | Not Available | + | 183660 - 185096 | 55137.8 |
| sialidase | DW191_00710 | Not Available | + | 185103 - 186737 | 60980.9 |
| s9 family peptidase | DW191_00715 | Not Available | - | 186809 - 188947 | 81999.6 |
| nad(+) diphosphatase | DW191_00720 | Not Available | - | 188975 - 189748 | 29423.2 |
| abc transporter atp-binding protein | DW191_00725 | Not Available | + | 190208 - 190882 | 24837.2 |
| ahpc/tsa family protein | DW191_00730 | Not Available | + | 191019 - 192164 | 43124.8 |
| s9 family peptidase | DW191_00740 | Not Available | + | 192998 - 195682 | 101904.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
