Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gastrointestinal tract; gut microbiomes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parabacteroides merdae strain AM16-50
Accession NumberQRKC00000000.1
Gene Summary
Adenine Count
1246323 bp
Thymine Count
1262000 bp
Guanine Count
1062193 bp
Cytosine Count
1024627 bp
Genome Length
4595261 bp
Protein-coding Genes
3646 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| port family protein | DW191_00590 | Not Available | - | 146322 - 146951 | 23151.8 |
| dna polymerase iii subunit alpha | DW191_00595 | Not Available | + | 147079 - 150879 | 143575.0 |
| thioredoxin | DW191_00600 | Not Available | + | 150948 - 151262 | 11492.9 |
| sam-dependent methyltransferase | DW191_00605 | Not Available | - | 151257 - 151937 | 25805.1 |
| tonb-dependent receptor | DW191_00610 | Not Available | + | 152018 - 154408 | 89713.5 |
| response regulator | DW191_00615 | Not Available | + | 154508 - 156892 | 90161.2 |
| sensor histidine kinase | DW191_00620 | Not Available | - | 156858 - 157859 | 37597.1 |
| sigma-54-dependent fis family transcriptional regulator | DW191_00625 | Not Available | - | 157856 - 159220 | 50999.9 |
| tolc family protein | DW191_00630 | Not Available | + | 159966 - 161435 | 56072.8 |
| efflux rnd transporter periplasmic adaptor subunit | DW191_00635 | Not Available | + | 161483 - 162733 | 47502.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
