Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gastrointestinal tract; gut microbiomes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parabacteroides merdae strain AM16-50
Accession NumberQRKC00000000.1
Gene Summary
Adenine Count
1246323 bp
Thymine Count
1262000 bp
Guanine Count
1062193 bp
Cytosine Count
1024627 bp
Genome Length
4595261 bp
Protein-coding Genes
3646 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | DW191_00440 | Not Available | + | 111172 - 113379 | 83041.3 |
| nicotinamide riboside transporter pnuc | DW191_00445 | Not Available | + | 113383 - 113997 | 23857.4 |
| thiamine diphosphokinase | DW191_00450 | Not Available | + | 113981 - 114610 | 22990.6 |
| hypothetical protein | DW191_00455 | Not Available | - | 114793 - 115137 | 13212.1 |
| duf3868 domain-containing protein | DW191_00460 | Not Available | - | 115239 - 116705 | 54095.8 |
| duf3575 domain-containing protein | DW191_00465 | Not Available | - | 116714 - 117271 | 21274.6 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | DW191_00470 | Not Available | + | 117639 - 117890 | 9681.56 |
| txe/yoeb family addiction module toxin | DW191_00475 | Not Available | + | 117872 - 118153 | 10842.0 |
| hypothetical protein | DW191_00480 | Not Available | - | 118166 - 118561 | 15533.6 |
| hypothetical protein | DW191_00485 | Not Available | - | 118680 - 120791 | 81318.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
