Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Tannerellaceae
Genus
Parabacteroides
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Tannerellaceae |
| Genus | Parabacteroides |
| Species | Parabacteroides merdae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | gastrointestinal tract; gut microbiomes |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Parabacteroides merdae strain AM16-50
Accession NumberQRKC00000000.1
Gene Summary
Adenine Count
1246323 bp
Thymine Count
1262000 bp
Guanine Count
1062193 bp
Cytosine Count
1024627 bp
Genome Length
4595261 bp
Protein-coding Genes
3646 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | DW191_00340 | Not Available | - | 78025 - 81315 | 120575.0 |
| duf4974 domain-containing protein | DW191_00345 | Not Available | - | 81574 - 82521 | 36461.8 |
| hypothetical protein | DW191_00350 | Not Available | + | 83086 - 83334 | 9591.77 |
| sigma-70 family rna polymerase sigma factor | DW191_00355 | Not Available | + | 83386 - 83970 | 23172.9 |
| duf4974 domain-containing protein | DW191_00360 | Not Available | + | 84050 - 85261 | 46082.0 |
| susc/raga family tonb-linked outer membrane protein | DW191_00365 | Not Available | + | 85378 - 88743 | 122824.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW191_00370 | Not Available | + | 88764 - 90236 | 55820.1 |
| glycoside hydrolase family 2 | DW191_00375 | Not Available | + | 90346 - 93114 | 104773.0 |
| tonb-dependent receptor | DW191_00380 | Not Available | + | 93393 - 96593 | 116668.0 |
| ragb/susd family nutrient uptake outer membrane protein | DW191_00385 | Not Available | + | 96608 - 98092 | 56143.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
