Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain AM17-44
Accession NumberQRJS00000000.1
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase | DW204_00230 | Not Available | - | 56187 - 57095 | 37403.6 |
| abc transporter atp-binding protein | DW204_00235 | Not Available | + | 57241 - 59082 | 69465.6 |
| glycosyltransferase | DW204_00240 | Not Available | - | 59152 - 60048 | 34432.5 |
| 5s ribosomal rna | Not Available | Not Available | + | 60634 - 60742 | Not Available |
| hypothetical protein | DW204_00245 | Not Available | - | 60058 - 60798 | 28271.0 |
| 23s ribosomal rna | Not Available | Not Available | + | 60847 - 63732 | Not Available |
| glycosyltransferase family 2 protein | DW204_00250 | Not Available | - | 60811 - 61527 | 27327.8 |
| 4-phosphoerythronate dehydrogenase pdxb | DW204_00255 | Not Available | + | 61772 - 62782 | 37842.3 |
| acyl carrier protein | DW204_00260 | Not Available | + | 62941 - 63177 | 8436.89 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | DW204_00265 | Not Available | + | 63193 - 64458 | 44670.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
