Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola plebeius |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola plebeius strain AM17-44
Accession NumberQRJS00000000.1
Gene Summary
Adenine Count
993827 bp
Thymine Count
973116 bp
Guanine Count
754189 bp
Cytosine Count
808576 bp
Genome Length
3530609 bp
Protein-coding Genes
2788 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-oxoacid:ferredoxin oxidoreductase subunit beta | DW204_00170 | Not Available | - | 41599 - 42609 | 36696.7 |
| 2-oxoacid:acceptor oxidoreductase subunit alpha | DW204_00175 | Not Available | - | 42643 - 44490 | 66537.2 |
| signal peptide peptidase sppa | DW204_00180 | Not Available | + | 44989 - 46749 | 65008.0 |
| tetraacyldisaccharide 4'-kinase | DW204_00185 | Not Available | + | 46765 - 47865 | 41626.9 |
| purine-nucleoside phosphorylase | DW204_00190 | Not Available | + | 47822 - 48631 | 29756.1 |
| thiamine-phosphate kinase | DW204_00195 | Not Available | + | 48639 - 49676 | 37881.5 |
| Trna-phe | Not Available | Not Available | + | 49900 - 49975 | Not Available |
| hypothetical protein | DW204_00210 | Not Available | + | 52053 - 52805 | 29647.4 |
| hypothetical protein | DW204_00220 | Not Available | + | 54263 - 55021 | 28536.3 |
| glycosyltransferase | DW204_00225 | Not Available | - | 55276 - 56175 | 33957.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
